PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31002-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 184aa    MW: 20654.2 Da    PI: 8.2751
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31002-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-1261114155
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      r+++h++ Er  R+++N+ +++Lr+llP  +   + +Kl+  +i+ ++++YI +Lq
  TRIUR3_31002-P1  61 RKMSHSAYERDSRKQLNEHYSNLRSLLPDdD--HHTRKLNNPTIVSRVIKYIPELQ 114
                      799**************************66..56666***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.72E-859117No hitNo description
SuperFamilySSF474596.94E-1459130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.38360113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1260129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-1061114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-666119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MEHQMFNDPF TSSMSSLEAE IFSGGHHHPA PSPQWPGLDH DIPAAPAANN ATSSGGPGSH  60
RKMSHSAYER DSRKQLNEHY SNLRSLLPDD DHHTRKLNNP TIVSRVIKYI PELQKEVDGL  120
EKKKEQLTRA SCRPGDDTAP IVSPTCLNDR EIMVQFYKKA VRKEATNNDV QMARMEAAMK  180
ARVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-110HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971295.15e-55PREDICTED: transcription factor ORG3-like
TrEMBLM8A4X51e-138M8A4X5_TRIUA; Transcription factor ORG2
STRINGMLOC_65345.11e-100(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32803472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-16bHLH family protein